Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9260
Gene Symbol: PDLIM7
PDLIM7
0.010 AlteredExpression disease BEFREE To characterize the oncogenic role of simian EBV infection for lymphomagenesis during SIV infection, expression of the EBV-encoded latent membrane protein-1 (LMP-1) was analyzed in malignant lymphomas of SIV-infected rhesus macaques. 11505452 2001
Entrez Id: 84868
Gene Symbol: HAVCR2
HAVCR2
0.010 Biomarker disease BEFREE Thus, rhesus Tim-3 in SIV infection partially mimics human Tim-3 in HIV infection and may serve as a novel model for targeted studies focused on rejuvenating HIV-specific CD8(+) T cell responses. 25348621 2014
Entrez Id: 3438
Gene Symbol: IFN1@
IFN1@
0.010 Biomarker disease BEFREE Thus, our data show that blocking IFN-I signaling during chronic SIV infection suppresses IFN-I-related inflammatory pathways without increasing virus replication, and thus may constitute a safe therapeutic intervention in chronic HIV infection. 30142226 2018
Entrez Id: 643
Gene Symbol: CXCR5
CXCR5
0.010 Biomarker disease BEFREE Thus, CXCR5+ CD8 T cells represent a unique subset of antiviral CD8 T cells that expand in LNs during chronic SIV infection and may play a significant role in the control of pathogenic SIV infection. 28159893 2017
Entrez Id: 10663
Gene Symbol: CXCR6
CXCR6
0.020 Biomarker disease BEFREE This review details emerging data indicating that in multiple natural host species, CCR5 is dispensable for SIV infection ex vivo and/or in vivo and, contrary to the established dogma, alternative coreceptors, particularly CXCR6, play a central role in infection and cell targeting. 29173179 2018
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.050 Biomarker disease BEFREE This review details emerging data indicating that in multiple natural host species, CCR5 is dispensable for SIV infection ex vivo and/or in vivo and, contrary to the established dogma, alternative coreceptors, particularly CXCR6, play a central role in infection and cell targeting. 29173179 2018
Entrez Id: 128344
Gene Symbol: PIFO
PIFO
0.010 GeneticVariation disease BEFREE This phenotype is likely relevant in humans, because we identified a heterozygous R80K PIFO mutation in a fetus with situs inversus and cystic liver and kidneys, and in patient with double-outflow right ventricle. 20643351 2010
Entrez Id: 940
Gene Symbol: CD28
CD28
0.010 AlteredExpression disease BEFREE This contrasted with the effector SIV-specific CD8(+) T-cells following SIV infection which expressed significantly higher amounts of PD-1 and lower amounts of CD28. 22403659 2012
Entrez Id: 406989
Gene Symbol: MIR206
MIR206
0.010 Biomarker disease BEFREE These results support a mechanistic role for decreased miR-206 in suppression of myoblast differentiation resulting from chronic alcohol and SIV infection. 28637658 2017
Entrez Id: 10410
Gene Symbol: IFITM3
IFITM3
0.020 GeneticVariation disease BEFREE These results and our previous work suggest that polymorphisms in the rhIFITM3 and rhIFITM3(2) genes do not strongly modulate the course of SIV infection in macaques. 31682595 2019
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.020 Biomarker disease BEFREE These preferences are shared with HLA-B*27 and Mamu-B*008, molecules shown to be involved in elite control in human HIV type 1 and macaque SIV infections, respectively. 29021373 2017
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
0.030 Biomarker disease BEFREE These data suggest that the NS1 protein of SIV is a virulence factor. 15919908 2005
Entrez Id: 10625
Gene Symbol: IVNS1ABP
IVNS1ABP
0.030 Biomarker disease BEFREE These data suggest that the NS1 protein of SIV is a virulence factor. 15919908 2005
Entrez Id: 2152
Gene Symbol: F3
F3
0.010 Biomarker disease BEFREE These data suggest that TF-expressing monocytes are at the epicenter of inflammation and coagulation in chronic HIV and SIV infection and may represent a potential therapeutic target. 28855397 2017
Entrez Id: 351
Gene Symbol: APP
APP
0.010 Biomarker disease BEFREE These data demonstrate that beta-APP accumulation in the white matter of SIV-infected macaques develops during SIV infection in close correlation with levels of viral replication and may serve as a sensitive marker of neuronal/axonal damage mediated by viral proteins. 11829347 2002
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.050 Biomarker disease BEFREE These data demonstrate an association between nonpathogenic SIV infection of SM and a reduced monocyte TNF-α response to LPS, and they identify a role for monocytes in contributing to the suppressed chronic immune activation observed in these natural hosts. 22553338 2012
Entrez Id: 468
Gene Symbol: ATF4
ATF4
0.010 AlteredExpression disease BEFREE The virus leverages transcription factor ATF4 expression during the GCN2-ATF4 signaling response and utilizes it to activate viral transcription through the LTR to support viral transcription and production in both HIV and SIV infections. 28465428 2017
Entrez Id: 3654
Gene Symbol: IRAK1
IRAK1
0.010 Biomarker disease BEFREE The T-cell-enriched miR-150 showed significant downregulation throughout SIV infection and was confirmed to target IRAK1, a critical signal-transducing component of the IL-1 receptor and TLR signaling pathways. 26937033 2016
Entrez Id: 406942
Gene Symbol: MIR150
MIR150
0.010 AlteredExpression disease BEFREE The T-cell-enriched miR-150 showed significant downregulation throughout SIV infection and was confirmed to target IRAK1, a critical signal-transducing component of the IL-1 receptor and TLR signaling pathways. 26937033 2016
Entrez Id: 308
Gene Symbol: ANXA5
ANXA5
0.010 Biomarker disease BEFREE The results from annexin V binding assay showed that SIV infection resulted in a lower proportion of vital cells and higher mortality compared with corresponding control (P<0.01). 15531296 2004
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.020 AlteredExpression disease BEFREE The profiles were significantly different during primary SIV infection in macaques (SIVmac); that is, there was a delayed increase in IL-10 levels accompanied by moderate and persistent increases in TGF-beta levels. 15761496 2005
Entrez Id: 27178
Gene Symbol: IL37
IL37
0.010 Biomarker disease BEFREE The potential role of IL37 in the control of SIV infection is discussed. 31138840 2019
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.010 Biomarker disease BEFREE The PD1/PD-L1 pathway contributes to the pathogenesis of HIV/SIV infection and blockade of this pathway may have potential to restore immune function and promote viral control/elimination. 31562760 2020
Entrez Id: 6614
Gene Symbol: SIGLEC1
SIGLEC1
0.010 AlteredExpression disease BEFREE The major finding by both a cross sectional and a prospective SIV infection study showed that, whereas monocytes from RM show marked increase in each Siglec constitutively expressed, monocytes from SM showed marked decreases in Siglec-1 expression. 18331725 2008
Entrez Id: 2302
Gene Symbol: FOXJ1
FOXJ1
0.010 Biomarker disease BEFREE The human FOXJ1 gene which maps to chromosome 17q, is thus an excellent candidate gene for Kartagener Syndrome (KS), a subphenotype of Primary Ciliary Dyskinesia (PCD), characterized by bronchiectasis, chronic sinusitis and situs inversus. 11060460 2000